Basic Information
Locus ID:
pistato.v30080760
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Introduction of a cis double bond between carbons of the acyl chain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 668571 | 680954 | - | pistato.v30080760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 153,573.59 Da | 35.45 | 80.23 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01050 | Acyl_ACP_Desat | 1004 | 1310 | 5.4553E-177 | IPR005067 |
| CDD | cd01050 | Acyl_ACP_Desat | 34 | 340 | 5.85304E-166 | IPR005067 |
| CDD | cd01050 | Acyl_ACP_Desat | 429 | 735 | 5.8945E-165 | IPR005067 |
| Pfam | PF03405 | Fatty acid desaturase | 1005 | 1326 | 4.3E-157 | IPR005067 |
| Pfam | PF03405 | Fatty acid desaturase | 34 | 359 | 1.3E-154 | IPR005067 |
| Pfam | PF03405 | Fatty acid desaturase | 798 | 936 | 2.9E-44 | IPR005067 |
| Pfam | PF03405 | Fatty acid desaturase | 429 | 754 | 3.7E-154 | IPR005067 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 800 | 935 | 1.29E-34 | IPR009078 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 421 | 758 | 1.33E-118 | IPR009078 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 26 | 363 | 3.12E-119 | IPR009078 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 990 | 1330 | 5.31E-128 | IPR009078 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 20 | 365 | 1.4E-165 | IPR012348 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 987 | 1332 | 4.6E-176 | IPR012348 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 415 | 758 | 6.3E-164 | IPR012348 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 795 | 943 | 7.8E-48 | IPR012348 |
| ProSitePatterns | PS00574 | Fatty acid desaturases family 2 signature. | 677 | 696 | - | IPR005803 |
| ProSitePatterns | PS00574 | Fatty acid desaturases family 2 signature. | 879 | 898 | - | IPR005803 |
| ProSitePatterns | PS00574 | Fatty acid desaturases family 2 signature. | 282 | 301 | - | IPR005803 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Reaction:
R03370 (Octadecanoyl-[acyl-carrier protein] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> Oleoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
R08161 (Hexadecanoyl-[acp] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> Hexadecenoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
R11108 (Hexadecanoyl-[acp] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> (4Z)-Hexadec-4-enoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
R11109 (Hexadecanoyl-[acp] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> (6Z)-Hexadec-6-enoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02630.1 | Plant stearoyl-acyl-carrier-protein desaturase family protein. | 0 |
| RefSeq | XP_031266439.1 | stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Pistacia vera] | 0 |
| Q41319 | Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic OS=Solanum commersonii OX=4109 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2NKV9 | Acyl-[acyl-carrier-protein] desaturase OS=Salix viminalis OX=40686 GN=SVIM_LOCUS494346 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl07025 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30080760 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq07G0313, Ceq07G0315 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl07G0319, Cgl07G0321, Cgl07G0322 |