Basic Information
Locus ID:
pistato.v30080400
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Tetratricopeptide repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 45251 | 49143 | - | pistato.v30080400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 62,775.44 Da | 51.18 | 59.65 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 404 | 488 | 1.9E-19 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 404 | 489 | 4.9E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 396 | - | - |
| Coils | Coil | Coil | 442 | 462 | - | - |
| Coils | Coil | Coil | 396 | 430 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_031266494.1 | uncharacterized protein LOC116124871 [Pistacia vera] | 0 |
| TrEMBL | A0A067GPW3 | PAPA-1 domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g009039mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology