Basic Information
Locus ID:
pistato.v30074120
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 17544865 | 17553516 | - | pistato.v30074120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 70,491.41 Da | 39.38 | 78.10 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 510 | 624 | 1.6E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 509 | 625 | 1.73E-17 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 48 | 94 | 4.84E-5 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 313 | 507 | 2.49E-24 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 40 | 96 | 2.9E-9 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 97 | 146 | 2.5E-9 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 502 | 633 | 2.0E-28 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 303 | 391 | 1.2E-6 | - |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 304 | 633 | 135.566925 | IPR030380 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 103 | 144 | 10.233572 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 54 | 95 | 9.197397 | IPR015940 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 509 | 633 | 21.067503 | IPR001525 |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_031249866.1 | DNA (cytosine-5)-methyltransferase DRM1 isoform X1 [Pistacia vera] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5BXY4 | DRM1 OS=Dimocarpus longan OX=128017 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology