Basic Information
Locus ID:
pistato.v30073890
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 16356741 | 16358788 | + | pistato.v30073890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.61 | 32,063.50 Da | 43.78 | 78.94 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 115 | 176 | 7.37073E-20 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 11 | 94 | 6.1E-22 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 183 | 265 | 3.3E-18 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 115 | 161 | 1.7E-12 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 177 | 271 | 3.1E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 163 | 277 | 3.0E-29 | - |
| SMART | SM00473 | ntp_6 | 101 | 175 | 1.5E-8 | IPR003609 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 87 | 176 | 8.428367 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 284 | 18.789045 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11330.3 | - | 0 |
| RefSeq | XP_035545357.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X5 [Juglans regia] | 0 |
| Q9SXB8 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8X8CHF0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_040553 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg11021 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30073780, pistato.v30073890 |