Basic Information
Locus ID:
pistato.v30073150
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 13084833 | 13088895 | + | pistato.v30073150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 101,220.56 Da | 38.52 | 102.58 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 682 | 787 | 4.9E-12 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 60 | 1.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 89 | 148 | 5.3E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 521 | 579 | 9.1E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 673 | 884 | 1.54E-33 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 306 | 593 | 1.36E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 371 | 2.86E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 771 | 2.4E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 612 | 1.4E-82 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 906 | 3.9E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 305 | 3.1E-75 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 183 | 208 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 158 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 232 | 256 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 5.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 543 | 566 | 90.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 914 | 12.075397 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 545 | 568 | 7.095899 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 686 | 709 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 914 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_031286425.1 | receptor-like protein kinase HSL1 [Pistacia vera] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GGE5 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g001867mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology