Basic Information
Locus ID:
pistato.v30072530
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 10534386 | 10538992 | - | pistato.v30072530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 69,701.49 Da | 34.17 | 88.79 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 390 | 572 | 3.01799E-89 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 31 | 190 | 7.7124E-90 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 28 | 194 | 4.2E-34 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 225 | 342 | 2.3E-23 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 435 | 560 | 3.6E-16 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 28 | 207 | 7.5E-43 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 390 | 583 | 1.25E-42 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 214 | 367 | 3.05E-35 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 384 | 571 | 5.7E-57 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 215 | 377 | 1.6E-43 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 26 | 200 | 2.8E-59 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 24 | 584 | 7.0E-209 | IPR012110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54960.1 | pyruvate decarboxylase-2. pyruvate decarboxylase-2 | 0 |
| RefSeq | XP_031268262.1 | pyruvate decarboxylase 1 [Pistacia vera] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B8MKY7 | pyruvate decarboxylase OS=Abrus precatorius OX=3816 GN=LOC113873786 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology