Basic Information
Locus ID:
pistato.v30072080
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 9795629 | 9800986 | - | pistato.v30072080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 51,911.54 Da | 39.41 | 98.24 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 9.0E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 273 | 359 | 3.8E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 245 | 361 | 2.53E-26 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 168 | 1.7E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 189 | 1.2E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 241 | 346 | 3.6E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 271 | 466 | 14.223764 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 277 | 299 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 100 | 113 | 3.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 145 | 158 | 3.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031253651.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 [Pistacia vera] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5P2L9 | Leucine-rich repeat transmembrane protein kinase OS=Populus alba OX=43335 GN=D5086_0000233360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology