Basic Information
Locus ID:
pistato.v30071730
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 9348180 | 9364484 | - | pistato.v30071730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 154,053.05 Da | 38.51 | 85.17 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1007 | 1275 | 1.73056E-89 | - |
| Pfam | PF11721 | Malectin domain | 52 | 172 | 3.4E-21 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 711 | 831 | 3.4E-21 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 346 | 412 | 9.2E-10 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1005 | 1272 | 1.3E-42 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 414 | 582 | 7.0E-22 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 207 | 270 | 8.7E-12 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 866 | 929 | 8.7E-12 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 586 | 2.29E-61 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 981 | 1281 | 1.62E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 966 | 1076 | 1.4E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 411 | 596 | 3.3E-46 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 51 | 276 | 3.5E-28 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 710 | 935 | 3.5E-28 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 307 | 410 | 1.6E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1077 | 1282 | 4.5E-50 | - |
| SMART | SM00220 | serkin_6 | 342 | 584 | 6.1E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1001 | 1273 | 1.2E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 342 | 590 | 25.37549 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1001 | 1279 | 35.622639 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1123 | 1135 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 434 | 446 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1342 | 1373 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G29750.1 | receptor-like kinase in flowers 1. Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains. | 0 |
| RefSeq | XP_024046760.1 | uncharacterized protein LOC18053078 [Citrus clementina] | 0 |
| Q9FXF2 | Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana OX=3702 GN=RKF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5N3K5 | Non-specific serine/threonine protein kinase OS=Citrus unshiu OX=55188 GN=CUMW_013580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology