Basic Information
Locus ID:
pistato.v30071390
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 8605779 | 8609453 | - | pistato.v30071390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 36,392.68 Da | 54.16 | 75.53 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00226 | DnaJ domain | 2 | 66 | 7.9E-8 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 1 | 67 | 1.7E-9 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 1 | 70 | 3.2E-9 | IPR036869 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 2 | 69 | 10.696352 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 216 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_031280836.1 | uncharacterized protein LOC116139300 [Pistacia vera] | 0 |
| TrEMBL | A0A5N6QUH7 | J domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_006548 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg36236 |
| Anacardiaceae | Pistacia vera | 11 | pistato.v30071390, pistato.v30079570, pistato.v30079870 ... |