Basic Information
Locus ID:
pistato.v30068810
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 4538270 | 4550591 | - | pistato.v30068810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 85,264.65 Da | 28.76 | 91.83 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 484 | 745 | 8.0085E-86 | - |
| Pfam | PF01476 | LysM domain | 48 | 92 | 0.036 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 480 | 747 | 2.0E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 460 | 748 | 1.89E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 458 | 548 | 1.2E-26 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 35 | 97 | 1.9E-5 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 762 | 1.0E-55 | - |
| SMART | SM00257 | LysM_2 | 336 | 385 | 15.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 221 | 256 | 3.4 | IPR018392 |
| SMART | SM00257 | LysM_2 | 47 | 92 | 0.06 | IPR018392 |
| SMART | SM00220 | serkin_6 | 478 | 750 | 1.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 478 | 751 | 38.831059 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 46 | 91 | 8.683634 | IPR018392 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 484 | 506 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 593 | 605 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_044462594.1 | chitin elicitor receptor kinase 1-like [Mangifera indica] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GF55 | Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g046083mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology