Basic Information
Locus ID:
pistato.v30068600
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 3859032 | 3872957 | + | pistato.v30068600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 144,972.86 Da | 31.27 | 89.54 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1025 | 1286 | 2.22769E-88 | - |
| CDD | cd14066 | STKc_IRAK | 449 | 710 | 1.02728E-82 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1021 | 1288 | 4.4E-47 | IPR001245 |
| Pfam | PF01476 | LysM domain | 766 | 802 | 0.027 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 445 | 712 | 2.4E-45 | IPR001245 |
| Pfam | PF01476 | LysM domain | 238 | 276 | 0.067 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 998 | 1289 | 1.75E-74 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 425 | 713 | 7.42E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 514 | 721 | 7.4E-55 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1090 | 1307 | 2.3E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 424 | 513 | 2.7E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 998 | 1089 | 7.1E-27 | - |
| SMART | SM00257 | LysM_2 | 757 | 802 | 0.76 | IPR018392 |
| SMART | SM00220 | serkin_6 | 1019 | 1292 | 8.4E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 443 | 715 | 7.6E-38 | IPR000719 |
| SMART | SM00257 | LysM_2 | 818 | 865 | 19.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 356 | 405 | 15.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 884 | 933 | 9.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 45 | 90 | 0.19 | IPR018392 |
| SMART | SM00257 | LysM_2 | 233 | 276 | 0.84 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 883 | 932 | 8.536466 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1019 | 1292 | 39.269211 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 443 | 716 | 38.590778 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1134 | 1146 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 449 | 471 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 558 | 570 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1025 | 1047 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_031260086.1 | chitin elicitor receptor kinase 1-like isoform X1 [Pistacia vera] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438EDN4 | LysM domain receptor-like kinase 3 OS=Vitis vinifera OX=29760 GN=LYK3_6 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology