Basic Information
Locus ID:
pistato.v30068540
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 3819716 | 3823705 | + | pistato.v30068540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 25,067.26 Da | 52.40 | 60.23 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 30 | 164 | 4.04998E-57 | - |
| Pfam | PF01426 | BAH domain | 31 | 143 | 7.8E-25 | IPR001025 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 138 | 195 | 9.75E-14 | IPR011011 |
| Gene3D | G3DSA:2.30.30.490 | - | 2 | 140 | 3.8E-32 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 141 | 206 | 3.0E-14 | IPR013083 |
| SMART | SM00439 | BAH_4 | 29 | 144 | 1.1E-41 | IPR001025 |
| SMART | SM00249 | PHD_3 | 148 | 191 | 9.9E-4 | IPR001965 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 29 | 144 | 24.009418 | IPR001025 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 220 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_031262180.1 | chromatin remodeling protein EBS [Pistacia vera] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | V4UFS4 | Chromatin remodeling protein EBS-like OS=Citrus clementina OX=85681 GN=CICLE_v10016559mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology