Basic Information
Locus ID:
pistato.v30067470
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 2454184 | 2456646 | + | pistato.v30067470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 66,113.81 Da | 36.43 | 93.66 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 302 | 565 | 4.6E-46 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 15 | 193 | 3.3E-26 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 569 | 2.35E-71 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 15 | 199 | 3.0E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 372 | 583 | 3.9E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 371 | 1.4E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 574 | 38.774521 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53430.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_031277872.1 | probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Pistacia vera] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | V4U1D5 | Protein kinase domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10024045mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30065220, pistato.v30065230, pistato.v30067340 ... |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.1224 |