Basic Information
Locus ID:
pistato.v30067390
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 2151440 | 2173582 | - | pistato.v30067390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 118,533.74 Da | 34.60 | 99.72 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 782 | 1034 | 2.5E-39 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 539 | 730 | 5.3E-22 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 214 | 272 | 3.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 200 | 5.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 112 | 474 | 2.72E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 784 | 1039 | 8.45E-60 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 537 | 4.9E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 71 | 227 | 5.2E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 844 | 1056 | 5.2E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 348 | 1.8E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 776 | 843 | 8.6E-6 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 538 | 736 | 1.3E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 307 | 330 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 259 | 282 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 6.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 235 | 258 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 306 | 99.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 163 | 186 | 23.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 763 | 1039 | 30.633337 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 189 | 212 | 7.018892 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 190 | 203 | 3.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 259 | 272 | 3.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53440.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_031252860.1 | probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Pistacia vera] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X7Y1T3 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_051534 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30065220, pistato.v30065230, pistato.v30067340 ... |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.1224 |