Basic Information
Locus ID:
pistato.v30067340
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
S-locus lectin protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 2083480 | 2087400 | - | pistato.v30067340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 61,782.86 Da | 29.76 | 90.00 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 25 | 204 | 2.8E-32 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 285 | 545 | 2.4E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 264 | 546 | 5.12E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 354 | 548 | 5.3E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 353 | 4.0E-15 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 23 | 209 | 1.8E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 265 | 548 | 33.149189 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07650.4 | - | 0 |
| RefSeq | XP_031268637.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Pistacia vera] | 0 |
| C0LGE0 | Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1 | 0 | |
| TrEMBL | A0A127AUN9 | LRR-RLK (Fragment) OS=Vernicia fordii OX=73154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30065220, pistato.v30065230, pistato.v30067340 ... |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.1224 |