Basic Information
Locus ID:
pistato.v30065570
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 329078 | 340815 | - | pistato.v30065570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 42,510.85 Da | 50.81 | 94.43 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 133 | 181 | 1.4E-6 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 241 | 306 | 1.4E-13 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 11 | 65 | 1.4E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 242 | 368 | 3.69E-24 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 116 | 183 | 1.9E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1 | 67 | 3.8E-21 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 236 | 316 | 5.3E-22 | - |
| SMART | SM00219 | tyrkin_6 | 200 | 368 | 0.0015 | IPR020635 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 67 | 17.285437 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 379 | 14.153094 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 75 | 183 | 13.51071 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 272 | 284 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_031279194.1 | cysteine-rich receptor-like protein kinase 15 isoform X2 [Pistacia vera] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8X7XN53 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_060577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2136 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah003627, Ah017478, Ah017734, Ah031514 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00011440, GOSA_00012107 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000033066 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30065570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1043300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG082020, gene_TRIDC3BG079770 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-11728, nbis-gene-20192, nbis-gene-22941 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-26558, nbisL1-mrna-29828 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12602, nbisL1-mrna-24800 |
| Salicaceae | Populus euphratica | 1 | populus_peu27963 |