Basic Information
Locus ID:
pistato.v30063850
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 42941554 | 42947843 | + | pistato.v30063850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 128,775.26 Da | 33.75 | 87.54 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01491 | Ube1_repeat1 | 150 | 535 | 9.10926E-151 | - |
| CDD | cd01490 | Ube1_repeat2 | 567 | 1106 | 0.0 | - |
| Pfam | PF09358 | Ubiquitin fold domain | 1059 | 1148 | 4.1E-22 | IPR018965 |
| Pfam | PF00899 | ThiF family | 548 | 1048 | 2.8E-73 | IPR000594 |
| Pfam | PF00899 | ThiF family | 152 | 526 | 2.2E-29 | IPR000594 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 325 | 396 | 2.4E-28 | IPR032418 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 397 | 466 | 1.8E-22 | IPR032420 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 735 | 988 | 6.1E-85 | IPR019572 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 542 | 1043 | 6.41E-130 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 144 | 532 | 3.53E-99 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 1061 | 1151 | 3.7E-20 | IPR038252 |
| Gene3D | G3DSA:3.40.50.720 | - | 568 | 1046 | 1.5E-195 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 720 | 995 | 1.5E-195 | IPR042063 |
| Gene3D | G3DSA:3.40.50.12550 | - | 269 | 558 | 6.1E-114 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 313 | 394 | 6.1E-114 | IPR042302 |
| Gene3D | G3DSA:3.50.50.80 | - | 141 | 259 | 4.4E-36 | IPR042449 |
| SMART | SM00985 | UBA_e1_C_a_2 | 1026 | 1148 | 8.1E-52 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 145 | 1153 | 0.0 | IPR018075 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 510 | 518 | - | IPR018074 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 727 | 735 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 642 | 667 | 4.3E-67 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 796 | 823 | 4.3E-67 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 595 | 618 | 4.3E-67 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 172 | 196 | 4.3E-67 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 287 | 314 | 4.3E-67 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30110.1 | ubiquitin-activating enzyme 1. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. | 0 |
| RefSeq | XP_031271882.1 | ubiquitin-activating enzyme E1 1 isoform X1 [Pistacia vera] | 0 |
| P93028 | Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana OX=3702 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067FUV5 | E1 ubiquitin-activating enzyme OS=Citrus sinensis OX=2711 GN=CISIN_1g001074mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology