Basic Information
Locus ID:
pistato.v30063680
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 41033199 | 41035804 | - | pistato.v30063680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 27,429.21 Da | 33.79 | 89.00 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 62 | 132 | 2.5E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 234 | 6.68E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 54 | 246 | 6.5E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 251 | 10.902274 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031270206.1 | proline-rich receptor-like protein kinase PERK1 [Pistacia vera] | 0 |
| Q9M092 | Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana OX=3702 GN=WAKL17 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803LEM8 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30037060, pistato.v30037080, pistato.v30063680 ... |