Basic Information
Locus ID:
pistato.v30063470
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 38594304 | 38598550 | - | pistato.v30063470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 113,032.46 Da | 38.95 | 93.44 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 722 | 994 | 6.26779E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 718 | 989 | 4.9E-51 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 531 | 568 | 3.1E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 256 | 282 | 0.002 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 7 | 246 | 6.3E-41 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 528 | 634 | 2.15E-15 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 247 | 1.41E-63 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 257 | 503 | 2.89E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 707 | 1006 | 6.71E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 792 | 1003 | 5.0E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 253 | 527 | 2.6E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 693 | 791 | 2.4E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 49 | 1.4E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 528 | 640 | 1.4E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 50 | 252 | 1.6E-55 | - |
| SMART | SM00220 | serkin_6 | 1 | 252 | 1.8E-18 | IPR000719 |
| SMART | SM00220 | serkin_6 | 716 | 995 | 2.8E-48 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 257 | 33.756954 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 716 | 995 | 40.343395 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 96 | 108 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 722 | 745 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 663 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_031275090.1 | LOW QUALITY PROTEIN: receptor-like kinase TMK3 [Pistacia vera] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HJC0 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018414 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 5 | pistato.v30063460, pistato.v30063470, pistato.v30218920 ... |