Basic Information
Locus ID:
pistato.v30062370
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
protein catabolic process in the vacuole
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 33334384 | 33336287 | + | pistato.v30062370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.61 | 17,365.68 Da | 41.41 | 89.13 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 96 | 158 | 3.2E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 158 | 2.08E-15 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 81 | 4.22E-8 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 160 | 3.4E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 83 | 2.5E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 161 | 12.612489 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_031270508.1 | L-type lectin-domain containing receptor kinase IV.2-like [Pistacia vera] | 0 |
| O80939 | L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK41 PE=2 SV=1 | 0 | |
| TrEMBL | W9S786 | L-type lectin-domain containing receptor kinase IV.1 OS=Morus notabilis OX=981085 GN=L484_009468 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah001975, Ah001976 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30062370 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0944 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate01g31340, gene.Thate01g31360, gene.Thate06g23940 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0430540.1.CDS1 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g16670.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0704353 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G005290 |
| Poaceae | Zea mays | 1 | Zm00001eb148870_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16554 |