Basic Information
Locus ID:
pistato.v30059740
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 30780209 | 30782375 | - | pistato.v30059740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 38,243.73 Da | 32.92 | 92.28 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 171 | 1.30401E-67 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 9.04995E-76 | - |
| Pfam | PF00190 | Cupin | 9 | 156 | 1.4E-26 | IPR006045 |
| Pfam | PF00190 | Cupin | 198 | 335 | 3.6E-22 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 13 | 344 | 7.29E-50 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 195 | 356 | 9.2E-50 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 3 | 194 | 4.1E-36 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 5.8E-20 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 4.7E-27 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 6.5E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 6.5E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 6.5E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 6.5E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 6.5E-15 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_031247531.1 | glutelin type-D 1-like [Pistacia vera] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5B1E4 | 11-S seed storage protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280220 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology