Basic Information
Locus ID:
pistato.v30057570
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 26864713 | 26874118 | + | pistato.v30057570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 133,645.78 Da | 43.26 | 77.14 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01111 | Cyclin-dependent kinase regulatory subunit | 1112 | 1178 | 1.1E-33 | IPR000789 |
| Pfam | PF16135 | Tify domain binding domain | 437 | 492 | 3.1E-15 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 625 | 671 | 6.9E-16 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 788 | 838 | 2.26E-7 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 940 | 1032 | 6.95E-6 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 668 | 739 | 5.96E-11 | IPR011011 |
| SUPERFAMILY | SSF55637 | Cell cycle regulatory proteins | 1104 | 1187 | 2.75E-35 | IPR036858 |
| Gene3D | G3DSA:3.40.630.30 | - | 886 | 1053 | 4.1E-5 | - |
| Gene3D | G3DSA:3.30.170.10 | - | 1097 | 1192 | 2.7E-38 | IPR036858 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 673 | 760 | 1.3E-14 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 761 | 853 | 9.6E-10 | IPR013083 |
| SMART | SM00249 | PHD_3 | 687 | 737 | 3.8E-4 | IPR001965 |
| SMART | SM00249 | PHD_3 | 784 | 841 | 0.019 | IPR001965 |
| SMART | SM01084 | CKS_2 | 1111 | 1180 | 1.9E-47 | IPR000789 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 685 | 739 | 8.5822 | IPR019787 |
| ProSitePatterns | PS00944 | Cyclin-dependent kinases regulatory subunits signature 1. | 1114 | 1132 | - | IPR000789 |
| PRINTS | PR00296 | Cyclin-dependent kinase regulatory subunit signature | 1163 | 1177 | 1.1E-23 | IPR000789 |
| PRINTS | PR00296 | Cyclin-dependent kinase regulatory subunit signature | 1148 | 1162 | 1.1E-23 | IPR000789 |
| PRINTS | PR00296 | Cyclin-dependent kinase regulatory subunit signature | 1111 | 1125 | 1.1E-23 | IPR000789 |
| PRINTS | PR00296 | Cyclin-dependent kinase regulatory subunit signature | 1126 | 1140 | 1.1E-23 | IPR000789 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 377 | - | - |
| Coils | Coil | Coil | 217 | 237 | - | - |
| Coils | Coil | Coil | 241 | 261 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_031268447.1 | uncharacterized protein LOC116126883 [Pistacia vera] | 0 |
| O23249 | Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CKS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067FAT4 | PHD-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g001383mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology