Basic Information
Locus ID:
pistato.v30055600
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 19002279 | 19023451 | - | pistato.v30055600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 135,489.94 Da | 41.80 | 79.19 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 193 | 522 | 5.35828E-170 | - |
| CDD | cd00121 | MATH | 52 | 175 | 1.00267E-39 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 195 | 517 | 2.6E-46 | IPR001394 |
| Pfam | PF00917 | MATH domain | 57 | 175 | 4.4E-20 | IPR002083 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 621 | 873 | 7.8E-79 | IPR024729 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 883 | 1093 | 3.6E-55 | IPR029346 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 48 | 182 | 1.01E-40 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 190 | 548 | 3.53E-98 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 681 | 798 | 1.2E-43 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 799 | 896 | 8.3E-28 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 49 | 191 | 2.3E-52 | IPR008974 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 192 | 521 | 2.9E-90 | - |
| SMART | SM00061 | math_3 | 52 | 156 | 8.1E-19 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 195 | 520 | 40.131878 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 50 | 175 | 38.775414 | IPR002083 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 435 | 452 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 196 | 211 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 529 | 560 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_044483130.1 | ubiquitin C-terminal hydrolase 12-like isoform X1 [Mangifera indica] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | V4SJQ8 | ubiquitinyl hydrolase 1 OS=Citrus clementina OX=85681 GN=CICLE_v10027709mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology