Basic Information
Locus ID:
pistato.v30052070
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Serine-threonine kinase receptor-associated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 4170090 | 4173150 | - | pistato.v30052070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 33,390.62 Da | 29.89 | 93.57 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00481 | Protein phosphatase 2C | 236 | 278 | 2.1E-4 | IPR001932 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 33 | 202 | 4.27E-19 | IPR036322 |
| SUPERFAMILY | SSF81606 | PP2C-like | 208 | 296 | 3.01E-7 | IPR036457 |
| Gene3D | G3DSA:3.60.40.10 | - | 194 | 299 | 1.6E-12 | IPR036457 |
| Gene3D | G3DSA:2.130.10.10 | - | 30 | 193 | 9.5E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 141 | 178 | 0.0093 | IPR001680 |
| SMART | SM00320 | WD40_4 | 98 | 138 | 3.9 | IPR001680 |
| Coils | Coil | Coil | 179 | 199 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52730.3 | - | 0 |
| RefSeq | XP_031256107.1 | serine-threonine kinase receptor-associated protein-like [Pistacia vera] | 0 |
| Q9LZ86 | Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana OX=3702 GN=PLL2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P5ZBA0 | serine-threonine kinase receptor-associated protein-like OS=Durio zibethinus OX=66656 GN=LOC111299068 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 4 | pistato.v30052070, pistato.v30193990, pistato.v30216730 ... |
| Poaceae | Zea mays | 1 | Zm00001eb397680_P001 |