Basic Information
Locus ID:
pistato.v30051130
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 2731213 | 2733890 | + | pistato.v30051130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 90,834.75 Da | 42.77 | 83.56 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04674 | Phosphate-induced protein 1 conserved region | 2 | 275 | 1.4E-23 | IPR006766 |
| Pfam | PF00069 | Protein kinase domain | 551 | 702 | 1.4E-18 | IPR000719 |
| SUPERFAMILY | SSF49854 | Spermadhesin, CUB domain | 313 | 410 | 5.63E-7 | IPR035914 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 550 | 733 | 3.79E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 532 | 784 | 2.9E-35 | - |
| Gene3D | G3DSA:2.60.120.290 | Spermadhesin, CUB domain | 306 | 406 | 1.8E-7 | IPR035914 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 549 | 814 | 19.15653 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32710.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031277227.1 | uncharacterized protein LOC116135651 [Pistacia vera] | 0 |
| O65530 | Proline-rich receptor-like protein kinase PERK14 OS=Arabidopsis thaliana OX=3702 GN=PERK14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IVM2 | CUB domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001929 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30051130 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_12_RagTag.63, evm.TU.Scaffold_12_RagTag.64 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24736 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000027l.250 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18901 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11605 |