Basic Information
Locus ID:
pistato.v30050660
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 2017588 | 2033366 | + | pistato.v30050660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 95,807.11 Da | 51.71 | 75.75 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 175 | 314 | 2.02226E-32 | - |
| CDD | cd00821 | PH | 21 | 120 | 2.53565E-12 | - |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 612 | 692 | 9.8E-22 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 175 | 319 | 1.7E-31 | IPR000198 |
| Pfam | PF00169 | PH domain | 20 | 124 | 3.1E-13 | IPR001849 |
| SUPERFAMILY | SSF50729 | PH domain-like | 16 | 131 | 9.04E-18 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 175 | 368 | 3.73E-34 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 140 | 368 | 1.5E-41 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 10 | 126 | 1.4E-17 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 172 | 363 | 4.2E-28 | IPR000198 |
| SMART | SM00233 | PH_update | 19 | 127 | 1.1E-15 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 166 | 366 | 30.280214 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 18 | 125 | 15.458 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 565 | - | - |
| Coils | Coil | Coil | 661 | 695 | - | - |
| Coils | Coil | Coil | 823 | 850 | - | - |
| Coils | Coil | Coil | 602 | 636 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_031284098.1 | rho GTPase-activating protein 7 isoform X2 [Pistacia vera] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IVT0 | Rho GTPase-activating protein 7-like OS=Acer yangbiense OX=1000413 GN=EZV62_001989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology