Basic Information
Locus ID:
pistato.v30050370
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 1473785 | 1479043 | + | pistato.v30050370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 49,267.89 Da | 38.84 | 82.00 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 2 | 309 | 2.7E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 325 | 396 | 4.6E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 2 | 310 | 3.81E-79 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 318 | 416 | 1.5E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 1 | 317 | 1.3E-106 | - |
| SMART | SM00768 | X8_cls | 324 | 409 | 6.9E-48 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_031280970.1 | glucan endo-1,3-beta-glucosidase 4-like [Pistacia vera] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | V4U9I0 | glucan endo-1,3-beta-D-glucosidase OS=Citrus clementina OX=85681 GN=CICLE_v10015028mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology