Basic Information
Locus ID:
pistato.v30049240
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 31379317 | 31383159 | + | pistato.v30049240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 108,092.77 Da | 32.11 | 105.10 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 698 | 969 | 1.7E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 504 | 529 | 0.7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 70 | 5.5E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 268 | 327 | 7.6E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 364 | 384 | 1.8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 77 | 424 | 8.63E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 971 | 7.24E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 372 | 620 | 1.39E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 772 | 5.0E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 142 | 3.7E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 980 | 9.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 627 | 5.7E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 231 | 333 | 2.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 230 | 3.6E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 266 | 289 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 696 | 978 | 9.7E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 481 | 505 | 5.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 314 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 577 | 602 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 38.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 696 | 978 | 37.67207 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 817 | 829 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_031283197.1 | receptor protein kinase CLAVATA1 [Pistacia vera] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | V4TA78 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000156mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology