Basic Information
Locus ID:
pistato.v30049220
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 31369329 | 31371308 | - | pistato.v30049220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 72,056.54 Da | 34.34 | 108.42 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 503 | 528 | 0.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 69 | 5.9E-9 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 291 | 313 | 0.037 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 363 | 383 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 530 | 589 | 1.8E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 330 | 618 | 6.01E-50 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 423 | 2.43E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 141 | 2.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 333 | 1.7E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 347 | 624 | 2.9E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 229 | 6.6E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 144 | 168 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 576 | 599 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 480 | 504 | 7.5 | IPR003591 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_031283131.1 | receptor protein kinase CLAVATA1-like [Pistacia vera] | 0 |
| Q8GRU6 | Leucine-rich repeat receptor-like kinase protein HAR1 OS=Lotus japonicus OX=34305 GN=HAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DP82 | receptor protein kinase CLAVATA1-like OS=Juglans regia OX=51240 GN=LOC108982112 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_22125, gene_22126 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011420 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41641, Sgl46440 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011472 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0003080 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049220 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G21477 |
| Casuarinaceae | Casuarina equisetifolia | 4 | Ceq01G0192, Ceq01G0193, Ceq01G0196, Ceq03G0864 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl01G0214, Cgl01G0215, Cgl03G0944 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1770, evm.TU.LG14.985 |