Basic Information
Locus ID:
pistato.v30049210
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 31364710 | 31368457 | - | pistato.v30049210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 103,860.83 Da | 38.10 | 99.97 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 818 | 877 | 3.8E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 579 | 601 | 0.13 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 315 | 356 | 2.5E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 651 | 671 | 1.4 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 594 | 912 | 6.12E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 306 | 4.19E-29 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 363 | 687 | 9.42E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 475 | 547 | 9.5E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 311 | 7.6E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 631 | 913 | 2.2E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 131 | 2.2E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 548 | 627 | 5.4E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 474 | 2.4E-37 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 553 | 576 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 840 | 864 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 768 | 792 | 5.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 577 | 600 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 650 | 673 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 251 | 275 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 721 | 745 | 30.0 | IPR003591 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_031283201.1 | receptor protein kinase CLAVATA1-like [Pistacia vera] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A7J8Q344 | LRRNT_2 domain-containing protein OS=Gossypium raimondii OX=29730 GN=Gorai_012798 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg6359 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049210 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1200.V1.1 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020657 |
| Poaceae | Echinochloa crus-galli | 2 | CH01.3016, CH06.1251 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G043200, gene-BS78_K002900 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G890400 |
| Poaceae | Triticum aestivum | 1 | TraesCSU02G171600.1.cds1 |