Basic Information
Locus ID:
pistato.v30049080
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
GDSL-like Lipase/Acylhydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 31278124 | 31282043 | - | pistato.v30049080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 54,588.80 Da | 33.57 | 92.35 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18322 | BTB_POZ_SKP1 | 339 | 455 | 8.18332E-62 | - |
| CDD | cd01837 | SGNH_plant_lipase_like | 46 | 318 | 2.0111E-124 | IPR035669 |
| Pfam | PF03931 | Skp1 family, tetramerisation domain | 338 | 397 | 5.5E-30 | IPR016073 |
| Pfam | PF01466 | Skp1 family, dimerisation domain | 441 | 488 | 1.2E-29 | IPR016072 |
| Pfam | PF00657 | GDSL-like Lipase/Acylhydrolase | 47 | 305 | 2.2E-23 | IPR001087 |
| SUPERFAMILY | SSF54695 | POZ domain | 338 | 398 | 4.71E-21 | IPR011333 |
| SUPERFAMILY | SSF81382 | Skp1 dimerisation domain-like | 413 | 488 | 1.22E-31 | IPR036296 |
| Gene3D | G3DSA:3.40.50.1110 | SGNH hydrolase | 34 | 328 | 3.8E-57 | IPR036514 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 333 | 490 | 2.0E-74 | IPR011333 |
| SMART | SM00512 | skp1_3 | 337 | 440 | 6.6E-53 | IPR001232 |
| ProSitePatterns | PS01098 | "Lipolytic enzymes ""G-D-S-L"" family, serine active site." | 47 | 58 | - | IPR008265 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42170.1 | SGNH hydrolase-type esterase superfamily protein. | 0 |
| RefSeq | XP_031283166.1 | uncharacterized protein LOC116141834 [Pistacia vera] | 0 |
| Q9FHW9 | GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana OX=3702 GN=At5g42170/At5g42160 PE=3 SV=2 | 0 | |
| TrEMBL | A0A6J1AAT4 | GDSL esterase/lipase At5g63170-like OS=Herrania umbratica OX=108875 GN=LOC110416222 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology