Basic Information
Locus ID:
pistato.v30043560
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 25552392 | 25558415 | - | pistato.v30043560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 71,372.30 Da | 33.91 | 96.41 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 50 | 88 | 4.9E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 116 | 175 | 1.0E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 188 | 204 | 1.6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 325 | 594 | 1.0E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 302 | 599 | 6.88E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 220 | 6.55E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 293 | 399 | 4.8E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 401 | 618 | 3.0E-66 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 48 | 234 | 5.6E-61 | IPR032675 |
| SMART | SM00220 | serkin_6 | 324 | 598 | 7.4E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 324 | 608 | 33.771088 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 447 | 459 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 330 | 352 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_031281369.1 | somatic embryogenesis receptor kinase 2-like [Pistacia vera] | 0 |
| B8BB68 | LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A151S8A5 | Protein kinase domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_027097 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology