Basic Information
Locus ID:
pistato.v30042400
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 24398496 | 24404623 | + | pistato.v30042400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 42,872.70 Da | 45.80 | 64.26 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 86 | 349 | 3.7E-74 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 257 | 352 | 3.53E-16 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 254 | 361 | 1.2E-34 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 259 | 359 | 21.335514 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 224 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22670.2 | indoleacetic acid-induced protein 8. IAA8 (IAA8) gene is auxin inducible. | 0 |
| RefSeq | XP_031279207.1 | auxin-responsive protein IAA8-like [Pistacia vera] | 0 |
| Q38826 | Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7H6A1 | Auxin-responsive protein OS=Acer yangbiense OX=1000413 GN=EZV62_021782 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology