Basic Information
Locus ID:
pistato.v30038080
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 18883318 | 18889760 | + | pistato.v30038080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 114,852.41 Da | 48.57 | 82.67 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 26 | 245 | 7.36783E-67 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 356 | 507 | 4.9E-22 | IPR001245 |
| Pfam | PF00139 | Legume lectin domain | 20 | 245 | 5.0E-49 | IPR001220 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 493 | 546 | 2.25E-5 | IPR011011 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 512 | 1.83E-37 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 19 | 251 | 6.06E-52 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 17 | 258 | 9.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 314 | 432 | 4.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 517 | 5.6E-16 | - |
| SMART | SM00220 | serkin_6 | 354 | 603 | 2.0E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 616 | 16.244926 | IPR000719 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 495 | 541 | - | IPR019786 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 360 | 382 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 798 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_031284661.1 | L-type lectin-domain containing receptor kinase S.6 [Pistacia vera] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2LWZ3 | Protein kinase domain-containing protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS275489 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology