Basic Information
Locus ID:
pistato.v30036740
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 15960496 | 15967591 | + | pistato.v30036740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 102,817.67 Da | 41.57 | 79.00 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 261 | 339 | 9.34404E-10 | - |
| CDD | cd00028 | B_lectin | 36 | 152 | 9.39354E-20 | IPR001480 |
| CDD | cd00028 | B_lectin | 526 | 672 | 9.40529E-21 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 807 | 885 | 1.39045E-11 | - |
| Pfam | PF00069 | Protein kinase domain | 396 | 502 | 2.0E-26 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 74 | 176 | 3.6E-26 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 594 | 697 | 1.6E-27 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 286 | 321 | 3.7E-7 | IPR003609 |
| Pfam | PF08276 | PAN-like domain | 832 | 868 | 1.6E-9 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 73 | 173 | 5.23E-18 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 594 | 701 | 9.16E-19 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 568 | 5.66E-41 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 386 | 518 | 5.8E-41 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 519 | 669 | 6.8E-14 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 21 | 149 | 2.1E-14 | IPR036426 |
| SMART | SM00108 | blect_4 | 33 | 152 | 1.5E-19 | IPR001480 |
| SMART | SM00473 | ntp_6 | 808 | 888 | 1.1E-7 | IPR003609 |
| SMART | SM00220 | serkin_6 | 305 | 578 | 1.7E-7 | IPR000719 |
| SMART | SM00473 | ntp_6 | 261 | 343 | 0.65 | IPR003609 |
| SMART | SM00108 | blect_4 | 525 | 672 | 6.7E-21 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 240 | 578 | 22.647627 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 27 | 145 | 12.120986 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 261 | 344 | 7.620126 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 519 | 666 | 12.363948 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 807 | 889 | 8.903208 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67520.3 | - | 0 |
| RefSeq | XP_044496561.1 | uncharacterized protein LOC123218967 [Mangifera indica] | 0 |
| O64793 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana OX=3702 GN=At1g67520 PE=2 SV=3 | 0 | |
| TrEMBL | A0A2H5PFQ6 | Non-specific serine/threonine protein kinase OS=Citrus unshiu OX=55188 GN=CUMW_132360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 6 | pistato.v30036730, pistato.v30036740, pistato.v30036770 ... |