Basic Information
Locus ID:
pistato.v30036730
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 15950791 | 15957782 | + | pistato.v30036730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 101,568.52 Da | 38.44 | 79.70 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 37 | 148 | 1.5641E-21 | IPR001480 |
| CDD | cd00028 | B_lectin | 200 | 315 | 3.66669E-19 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 237 | 340 | 3.0E-28 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 83 | 147 | 2.6E-10 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 793 | 855 | 1.8E-8 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 469 | 502 | 1.7E-5 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 652 | 747 | 1.8E-24 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 82 | 147 | 4.58E-10 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 624 | 750 | 2.01E-38 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 783 | 858 | 2.36E-6 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 229 | 342 | 1.7E-20 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 651 | 780 | 1.0E-35 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 27 | 155 | 8.3E-12 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 190 | 312 | 2.0E-12 | IPR036426 |
| SMART | SM00220 | serkin_6 | 592 | 859 | 1.4E-6 | IPR000719 |
| SMART | SM00108 | blect_4 | 36 | 151 | 2.4E-15 | IPR001480 |
| SMART | SM00108 | blect_4 | 197 | 315 | 1.6E-17 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 436 | 658 | 8.0E-22 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 14 | 151 | 4.0E-21 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 655 | 769 | 1.9E-57 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 866 | 905 | 0.024 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 765 | 861 | 6.4E-10 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 164 | 432 | 1.5E-47 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 30 | 155 | 13.041685 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 541 | 820 | 19.693621 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 191 | 308 | 11.954748 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 668 | 680 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16030.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_031250259.1 | LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Pistacia vera] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | V4ULH4 | Receptor-like serine/threonine-protein kinase OS=Citrus clementina OX=85681 GN=CICLE_v10024887mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 6 | pistato.v30036730, pistato.v30036740, pistato.v30036770 ... |