halophFGD

Basic Information

Locus ID: pistato.v30036290

Species & Taxonomic ID: Pistacia vera & 55513

Genome Assembly: GWHBKLD00000000

Description: Cell division cycle

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	15158643	15159796	-	pistato.v30036290

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.02	18,334.56 Da	50.82	82.25	-0.50

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF50978	WD40 repeat-like	66	155	7.02E-13	IPR036322
Gene3D	G3DSA:2.130.10.10	-	38	160	1.6E-19	IPR015943
SMART	SM00320	WD40_4	74	115	2.0	IPR001680
SMART	SM00320	WD40_4	118	158	4.2	IPR001680

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K03363 (cell division cycle 20, cofactor of APC complex)

Pathway:

ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G22910.1	FIZZY-related 2.	0
RefSeq	XP_044493642.1	cell division cycle 20.3, cofactor of APC complex-like [Mangifera indica]	0
Swiss-Prot	Q9M7I2	B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1	0
TrEMBL	A0A067ERC2	ANAPC4_WD40 domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019847mg PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

No orthogroup found for pistato.v30036290.