Basic Information
Locus ID:
pistato.v30032920
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5773289 | 5777844 | + | pistato.v30032920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 152,894.20 Da | 41.27 | 103.61 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 163 | 411 | 3.5E-30 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 1099 | 1327 | 1.53E-16 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 156 | 425 | 4.66E-42 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 763 | 887 | 1.49E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 486 | 1148 | 1.19E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 535 | 892 | 2.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1144 | 1342 | 8.5E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 901 | 1006 | 3.5E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1007 | 1102 | 5.9E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 413 | 8.7E-14 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 145 | 326 | 1.2E-29 | IPR027417 |
| SMART | SM00382 | AAA_5 | 177 | 330 | 3.5E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 358 | 372 | 1.4E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 636 | 652 | 1.4E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 1.4E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 1.4E-19 | - |
| Coils | Coil | Coil | 38 | 72 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031253852.1 | probable disease resistance protein At4g27220 isoform X1 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQW4 | NB-ARC domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_017004 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology