Basic Information
Locus ID:
pistato.v30032880
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5633737 | 5642434 | + | pistato.v30032880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 158,982.56 Da | 46.14 | 102.58 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 161 | 267 | 0.00501177 | - |
| Pfam | PF00931 | NB-ARC domain | 166 | 414 | 5.3E-34 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 753 | 1003 | 4.08E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 488 | 1195 | 5.61E-25 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1096 | 1249 | 5.57E-6 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 162 | 428 | 4.44E-44 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 529 | 689 | 3.0E-20 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 149 | 324 | 8.8E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 906 | 1263 | 4.9E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 690 | 905 | 2.4E-10 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 329 | 417 | 1.2E-14 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 1.1E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 252 | 266 | 1.1E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 362 | 376 | 1.1E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 639 | 655 | 1.1E-19 | - |
| Coils | Coil | Coil | 38 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031272218.1 | uncharacterized protein LOC116130624 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ50 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology