Basic Information
Locus ID:
pistato.v30032870
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5566086 | 5585862 | + | pistato.v30032870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 212,036.89 Da | 41.22 | 102.76 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 165 | 271 | 6.50815E-4 | - |
| Pfam | PF00931 | NB-ARC domain | 299 | 419 | 4.9E-17 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 624 | 679 | 2.6E-6 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 166 | 288 | 4.3E-19 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 1264 | 1496 | 6.04E-12 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 492 | 896 | 3.23E-28 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 152 | 432 | 1.72E-45 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1032 | 1315 | 1.61E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 536 | 979 | 2.4E-38 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 151 | 330 | 1.4E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1316 | 1522 | 3.6E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 332 | 421 | 1.6E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1046 | 1163 | 7.3E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1166 | 1256 | 8.4E-6 | IPR032675 |
| SMART | SM00382 | AAA_5 | 180 | 351 | 2.1E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 183 | 198 | 1.3E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 366 | 380 | 1.3E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 643 | 659 | 1.3E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 256 | 270 | 1.3E-19 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1744 | 1763 | - | - |
| Coils | Coil | Coil | 779 | 799 | - | - |
| Coils | Coil | Coil | 42 | 76 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031280232.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ30 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology