Basic Information
Locus ID:
pistato.v30032850
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5508095 | 5516562 | + | pistato.v30032850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 210,280.25 Da | 42.68 | 102.37 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 165 | 410 | 7.4E-32 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 486 | 1055 | 3.49E-24 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 154 | 425 | 9.87E-42 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1625 | 1800 | 1.26E-5 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1363 | 1626 | 2.9E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1012 | 1258 | 7.85E-10 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 413 | 1.4E-10 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1624 | 1816 | 8.7E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 901 | 1084 | 1.1E-10 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 326 | 2.7E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1096 | 1277 | 1.9E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 522 | 900 | 1.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1323 | 1623 | 5.4E-13 | IPR032675 |
| SMART | SM00382 | AAA_5 | 177 | 347 | 6.3E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 3.8E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 358 | 372 | 3.8E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 635 | 651 | 3.8E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 3.8E-18 | - |
| Coils | Coil | Coil | 31 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031275032.1 | uncharacterized protein LOC116133468 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IYE2 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology