Basic Information
Locus ID:
pistato.v30032670
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5174134 | 5178716 | + | pistato.v30032670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 146,431.22 Da | 39.07 | 103.05 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 164 | 409 | 4.4E-34 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 154 | 423 | 1.02E-44 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 906 | 1258 | 2.21E-13 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 485 | 880 | 1.11E-21 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 325 | 2.6E-31 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 522 | 899 | 5.3E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1094 | 1264 | 8.4E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 327 | 412 | 3.7E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 900 | 1068 | 2.8E-9 | IPR032675 |
| SMART | SM00382 | AAA_5 | 176 | 329 | 3.3E-7 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 357 | 371 | 1.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 634 | 650 | 1.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 1.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 253 | 267 | 1.5E-19 | - |
| Coils | Coil | Coil | 45 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031253850.1 | probable disease resistance protein At4g27220 isoform X1 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ50 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology