Basic Information
Locus ID:
pistato.v30032660
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5137620 | 5143119 | + | pistato.v30032660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 136,298.34 Da | 40.00 | 100.89 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 163 | 409 | 7.6E-32 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 155 | 424 | 2.78E-42 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 810 | 1058 | 3.3E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 485 | 879 | 2.52E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 902 | 1194 | 1.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 145 | 325 | 5.2E-29 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 327 | 412 | 1.1E-13 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 734 | 901 | 2.1E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 514 | 725 | 2.2E-21 | IPR032675 |
| SMART | SM00382 | AAA_5 | 177 | 329 | 0.0025 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 634 | 650 | 6.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 6.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 357 | 371 | 6.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 253 | 267 | 6.0E-19 | - |
| Coils | Coil | Coil | 38 | 58 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031275032.1 | uncharacterized protein LOC116133468 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ50 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology