Basic Information
Locus ID:
pistato.v30032610
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4978542 | 4979699 | + | pistato.v30032610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 43,309.08 Da | 31.32 | 88.03 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 162 | 371 | 5.4E-28 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 152 | 380 | 2.0E-35 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 143 | 322 | 1.1E-27 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 324 | 381 | 4.2E-10 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 250 | 264 | 6.8E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 176 | 191 | 6.8E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 354 | 368 | 6.8E-14 | - |
| Coils | Coil | Coil | 34 | 68 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61190.4 | - | 0 |
| RefSeq | XP_031253851.1 | probable disease resistance protein At4g27220 isoform X2 [Pistacia vera] | 0 |
| O22727 | Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana OX=3702 GN=At1g61190 PE=3 SV=1 | 0 | |
| TrEMBL | A0A067DIA8 | AAA domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g042728mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology