Basic Information
Locus ID:
pistato.v30032330
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4510374 | 4522189 | + | pistato.v30032330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 182,739.31 Da | 42.02 | 100.85 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 164 | 411 | 3.3E-32 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 922 | 1167 | 1.18E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 485 | 880 | 4.25E-22 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 154 | 424 | 1.22E-43 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1188 | 1423 | 1.84E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1061 | 1176 | 1.1E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 533 | 980 | 1.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1177 | 1335 | 5.5E-10 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 413 | 3.9E-15 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 326 | 1.1E-28 | IPR027417 |
| SMART | SM00382 | AAA_5 | 177 | 347 | 7.9E-5 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 3.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 635 | 651 | 3.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 358 | 372 | 3.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 3.5E-19 | - |
| Coils | Coil | Coil | 34 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031253850.1 | probable disease resistance protein At4g27220 isoform X1 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IXP6 | NB-ARC domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002497 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology