Basic Information
Locus ID:
pistato.v30032210
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4160201 | 4164258 | - | pistato.v30032210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 137,537.97 Da | 41.31 | 105.58 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 163 | 411 | 4.1E-34 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 151 | 425 | 1.94E-44 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 485 | 988 | 7.82E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 888 | 1198 | 3.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 146 | 326 | 3.5E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 508 | 882 | 7.2E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 413 | 6.5E-14 | IPR042197 |
| SMART | SM00382 | AAA_5 | 177 | 346 | 2.1E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 3.6E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 3.6E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 635 | 651 | 3.6E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 358 | 372 | 3.6E-19 | - |
| Coils | Coil | Coil | 31 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031247968.1 | uncharacterized protein LOC116105696 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ50 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology