Basic Information
Locus ID:
pistato.v30032180
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4136501 | 4140214 | + | pistato.v30032180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 58,029.00 Da | 52.19 | 87.27 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 88 | 188 | 7.7E-17 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 211 | 296 | 3.2E-12 | IPR002902 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 469 | 1.9E-6 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 203 | 300 | 2.6E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 81 | 190 | 1.3E-20 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 82 | 190 | 17.77425 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 195 | 300 | 18.779032 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11460.3 | - | 0 |
| RefSeq | XP_031247969.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q9LDT0 | Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CRK30 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5C7GRN9 | Gnk2-homologous domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026473 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30032140, pistato.v30032180, pistato.v30200010 |