Basic Information
Locus ID:
pistato.v30032140
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 3949591 | 3953646 | + | pistato.v30032140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 60,257.79 Da | 50.33 | 88.88 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 88 | 187 | 2.1E-16 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 210 | 295 | 8.8E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 501 | 9.62E-14 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 81 | 189 | 9.5E-20 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 370 | 485 | 5.5E-18 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 202 | 299 | 7.8E-24 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 82 | 189 | 17.249228 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 194 | 299 | 18.625147 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11460.3 | - | 0 |
| RefSeq | XP_031247969.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q9LDT0 | Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CRK30 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5C7GRN9 | Gnk2-homologous domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026473 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30032140, pistato.v30032180, pistato.v30200010 |