Basic Information
Locus ID:
pistato.v30030420
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 34924157 | 34930634 | + | pistato.v30030420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 108,965.01 Da | 44.00 | 99.11 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 174 | 384 | 1.8E-45 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 168 | 418 | 2.71E-43 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 512 | 916 | 1.17E-30 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 145 | 315 | 1.1E-28 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 319 | 410 | 1.0E-14 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 724 | 926 | 2.2E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 492 | 716 | 2.4E-26 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 353 | 367 | 8.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 631 | 647 | 8.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 187 | 202 | 8.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 261 | 275 | 8.0E-19 | - |
| Coils | Coil | Coil | 245 | 265 | - | - |
| Coils | Coil | Coil | 443 | 463 | - | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031255418.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | V4T8H5 | AAA domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018706mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |