Basic Information
Locus ID:
pistato.v30030200
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 34540020 | 34549252 | + | pistato.v30030200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 87,935.02 Da | 43.85 | 73.23 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 369 | 740 | 3.8E-37 | IPR001525 |
| Pfam | PF01426 | BAH domain | 184 | 293 | 3.6E-11 | IPR001025 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 335 | 740 | 5.65E-71 | IPR029063 |
| Gene3D | G3DSA:2.30.30.490 | - | 115 | 280 | 4.3E-45 | IPR043151 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 533 | 706 | 7.2E-208 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 373 | 757 | 7.2E-208 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 281 | 352 | 4.9E-7 | - |
| SMART | SM00439 | BAH_4 | 179 | 295 | 5.5E-24 | IPR001025 |
| TIGRFAM | TIGR00675 | dcm: DNA (cytosine-5-)-methyltransferase | 382 | 737 | 2.9E-31 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 179 | 295 | 18.737696 | IPR001025 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 302 | 747 | 39.172695 | IPR001525 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 385 | 397 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 474 | 487 | 2.3E-10 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 337 | 353 | 2.3E-10 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 428 | 442 | 2.3E-10 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 42 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_031267644.1 | DNA (cytosine-5)-methyltransferase CMT2-like [Pistacia vera] | 0 |
| Q94F87 | DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana OX=3702 GN=CMT2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A2H5QFQ4 | Cytosine-specific methyltransferase (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_225700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology